Plant and Animal Whole Genome Resequencing

Plant and Animal Whole Genome Resequencing

Service Description

Plant and animal whole genome re-sequencing (WGRS) involves sequencing the entire genome of a plant or animal, and comparing the sequence to that of a known reference genome. Re-sequencing of the plant and animal genome will identify genetic variations such as SNPs and InDels, and discover other genetic changes of the sequenced species.  It has been applied for the identification of functional genes and markers of important traits to facilitate molecular breeding and to improve agricultural production and conservation.

 

Choice of Platforms for Plant and Animal WGRS

BGI Plant and Animal Whole Genome Re-sequencing services are executed with the Illumina sequencing system, or exclusively with the DNBseq sequencing technology, for great sequencing data at the lowest cost in the industry.

DNBseq™ is BGI’s proprietary sequencing technology, developed by our Complete Genomics subsidiary in Silicon Valley.

 

Give our DNBseq Plant and Animal WGRS services a try and find out why so many trust their valuable research samples to the world-class sequencing experience of BGI.

BGISEQ human whole genome sequencing

Ask your BGI representative about our current introductory pricing for Plant and Animal Resequencing with the BGI’s own DNBseq sequencing technology.

Request a No Obligation Quote!

Applications

Project Workflow

We care for your samples from the start through to the result reporting. Highly experienced laboratory professionals follow strict quality procedures to ensure the integrity of your results.

  • Sample QC
  • Library QC
  • Sequencing QC
  • Data QC
  • Sample preparation
  • Library construction
  • Sequencing
  • Raw data output
  • Bioinformatics analysis

How to order

Request a Quote

Send us a no obligation request for quote and our dedicated sales team will reply to you within 24 hours.

Create an Online myBGI Account

Create a myBGI account to view all our sample and shipping documentation and to manage your project moving forwards. It's quick, free and easy!

Sequencing Service Specification

BGI Plant and Animal Whole Genome Re-sequencing services are executed with the DNBseq sequencing technology and Illumina sequencing system.

  • Sample Preparation and Services

    Sample Preparation and Services

    • 100bp Paired-End sequencing for DNBseq and 150bp Paired-End sequencing for HiSeq
    • Raw data and bioinformatics analysis are available in standard file formats
    • Online data storage and delivery system
    • Advanced and custom bioinformatics data analysis
  • Sequencing Quality Standard

    Sequencing Quality Standard

    • Guaranteed ≥90% of bases with quality score of Q20
    • Standard sequencing coverage 5-10X for population study
    • Standard sequencing coverage 10-30X for individual study
  • Turn Around Time

    Turn Around Time

    • Typical 30-40 working days from sample QC acceptance to filtered raw data availability, depending on sequencing system
    • Expedited services are available, contact your local BGI specialist for details

Sample Requirements

We can process your gDNA samples, with the following general requirements:

DNA Mass and Concentration

Minimum sample volume

Regular Samples

Intact genomic DNA ≥ 1µg, Concentration ≥ 12.5 ng/ µl

15 μl

Low Input Samples

Intact genomic DNA ≥ 200 ng, Concentration ≥ 2.5 ng/ µl

15 μl

Data Analysis

Besides clean data output, BGI offers a range of standard and customized bioinformatics pipelines for your plant and animal whole genome re-sequencing project.

Standard Analysis

  • Sequenced data basic analysis

  • Alignment

  • Statistics of data production

  • Assembly of consensus sequences

  • SNP calling, annotation and statistics

Available advanced analysis

  • Variation detection (Indel, SV, CNV)

  • Population evolution analysis

  • Point mutation detection (wild vs. mutant)

  • Point mutation detection (MutMap)

  • HapMap construction

  • GWAS analysis

  • Linkage map construction and QTL mapping

  • BSA analysis

Customized analysis

Further customization of Bioinformatics analysis to suit your unique project is available: please contact your BGI technical representative

WGRS Resources

We care for your samples from the start through to the result reporting. Highly experienced laboratory professionals follow strict quality procedures to ensure the integrity of your results.